Bionumerics生物信息分析软件应用简介.ppt

One powerful platform for databasing, analyzing, and sharing all your biological data Fingerprint Data. Normalization and analysis of electrophoresis fingerprints from slab gels, automated sequencers, and lab-on-a chip systems. Preprocessing and analysis of spectral data such as MALDI. Character Data. Import and analyze character data from a wide range of sources including phenotype panels, antibiotic resistance profiles, microarrays, etc. Sequence Data. Assemble and analyze Sanger sequence data and NGS sequence reads. Access a wide variety of sequence analysis, search and alignment, and comparison tools. Whole Genome Map Data. Align and cluster whole genome maps for bacterial strain typing and identification. Trend Data. Analyze sequential measurements that express an evolution of one parameter in function of another, e.g., enzymatic activity, growth curves, rt-PCR, etc. Tree and Network Inference. Select from an impressive range of clustering algorithms to calculate evolutionary trees and relationship networks. Display confidence levels on clusters and branches. Dimensioning and Matrix Mining. Create non-hierarchical groupings using various ordination techniques such as principal components analysis, multidimensional scaling, discriminant analysis, and identify discriminating features between groups. Perform in-depth analysis of character matrices. Genome Analysis Tools. Align and compare chromosomes side-by-side or calculate multiple chromosome alignments. Calculate SNPs and mutations on multi-chromosome alignments and annotate new chromosomes. Perform microbial metagenomics diversity analysis. Classifiers and Identification. Identify unknown samples against reference data sets using state-of-the-art classifiers such as Naive Bayesian, SVM, Shrunken Centroids, and a range of similarity coefficients. Enhance your identification projects with parameter optimization and comprehensive cross-validation tools. Compare and validate different techniques or procedures.