以三态二级结构预测蛋白质折叠速率 - wiley.doc

Supplementary Materials TABLE II. List of Proteins. No. Class Protein PDB L L( L( Lloop lnkf Ref. Proteins with three-state kinetics 1 (/( Tryptophan synthase β2-subunit 1QOP_B 396 229 82 85 -6.91 1 2 (/( C-terminal domain from PGKy, domain: 177(394 1PHP 390 220 64 106 -3.45 2 3 (/( Tryptophan synthase α-subunitz 1QOP_A 268 162 39 67 -2.53 3 4 (/( Ribonuclease HIv 2RN2 165 75 30 60 0.69 4 5 (/( GroEL apical domain 1JON 155 60 43 52 0.83 5 6 (/( CheY 3CHY 128 71 23 34 0.92 6 7 All-( Apomyoglobinu 1A6N 151 136 0 15 1.15 7 8 All-( CRBP II 1OPA 135 32 73 30 1.38 8 9 All-( ILBPt 1EAL 127 24 67 36 1.38 9 10 (+( Lysozyme (hen rgg white) 1HEL 129 90 14 25 1.39 10,11 11 All-( CD2, 1st domain 1HNG 176 27 91 58 1.84 12 12 (/( N-terminal domain from PGK, domain: 1(176 1PHP 176 95 28 53 2.30 11 13 (+( Barnase 1BNI 110 40 24 46 2.53 13 14 (/( Barstar 1BTA 89 53 16 20 3.43 14 15 (+( P16 protein 2A5E 156 93 2 61 3.45 15 16 All-( IFABP from rat 1IFC 89 51 16 22 3.45 8 17 All-( Cro protein 2CRO 71 49 0 22 3.68 16 18 All-( Twitchin Ig repeat 27 1TIT 98 4 34 60 3.68 17 19 (+( Suc1s 1SCE 112 36 10 66 4.14 18 20 (+( HypF-N 1GXT 91 24 35 32 4.37 19 21 All-( Colicin E7 immunity protein 1CEI 87 59 2 26 5.76 20 Proteins with two-state kinetics 22 (+( Muscle-AcP 1APS 98 27 35 36 -1.48 21 23 All-( AH3-domain (PI3 kinase) 1PNJ 86 16 26 44 -1.15 22 24 All-( Fibronectin 9th FN3 module, domain: 1142(1235 1FNF 94 9 44 41 -0.92 23 25 All-( Twitchin 1WIT 93 20 53 20 0.46 24 26 (+( Common-type Acp 2ACY 98 33 38 27 0.92 25 27 All-( Tenascin (short form) 1TEN 90 9 47 34 1.06 26 28 All-( PsaE 1PSE 69 11 19 39 1.17 27 29 (+( FKBP12 1FKB 107 37 42 28 1.46 28 30 All-( SH3 domain 1AEY 62 9 28 25 2.09 29,30 31 (+( His-containing phosphocarrier protein 1POH 85 43 23 19 2.76 31 32 (+( Ci2 2CI2 83 24 20 39 3.91 32 33 All-( SH3 domain (src) 1SRL 64 4 20 40 4.04 33 34 (+( IgG-binding domain of streptococcal protein L 2PTL 78 18 20 40 4.10 34