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RNA Splicing and Processing
CHAPTER OUTLINE
Introduction Ul snRNP Initiates Splicing
Nuclear Splice Junctions Are Short Sequences • U1 snRNP initiates splicing by binding to the 5 splice site
by means of an RNA-RNA pairing reaction.
• Splice sites are the sequences immediately surrounding the
exon-intron boundaries. They are named for their positions • The Ecomplex contains U1 snRNP bound at the 5 splice
relative to the intron. site, the protein U2AF bound to a pyrimidine tract between
the branch site and the 3 splice site, and SR proteins con
• The 5 splice site at the 5 (left) end of the intron includes
the consensus sequence GU. necting U1 snRNP to U2AF.
• The 3 splice site at the 3 (right) end of the intron includes The E Complex Can be Formed by Intron Definition or
the consensus sequence AG. Exon Definition
• The GU-AG rule (originally called the GT-AG rule in terms of • The direct way of forming an E complex is for U1 snRNP to
DNA sequence) describes the requirement for these constant bind at the 5 splice site and U2AF to bind at a pyrimidine
dinucleotides at the first two
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