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IEEE TRANSACTIONS ON EVOLUTIONARY COMPUTATION, VOL. 5, NO. 1, FEBRUARY 2001 17
A Comparison of Linear Genetic Programming and
Neural Networks in Medical Data Mining
Markus Brameier and Wolfgang Banzhaf
Abstract—We introduce a new form of linear genetic program- In contrast to NNs, GP has not been used extensively for med-
ming (GP). Two methods of acceleration of our GP approach are ical applications to date. Gray et al. [11] report from an early
discussed: 1) an efficient algorithm that eliminates intron code and application of GP in cancer diagnosis, where the results had
2) a demetic approach to virtually parallelize the system on a single
processor. Acceleration of runtime is especially important when been found to be better than with an NN. In [16], a grammar-
operating with complex data sets, because they are occuring in based GP variant is used for knowledge extraction from medical
real-world applications. We compare GP performance on medical databases. Rules for the diagnosis have been derived from the
classification problems from a benchmark database with results program tree that uncover relationships among data attributes.
obtained by neural networks. Our results show that GP performs The outcomes of different types of classifiers, including NNs
comparable in classification and generalization.
and genetic programs, are combined in [25]. This strategy re-
Index Terms—Data mining, evolutionary computation, genetic sults in an improved prediction of thyroid normal and thyroid
programming, neural networks.
carcinoma classes.
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